CRAN Package Check Results for Package mcmcabn

Last updated on 2023-10-01 05:53:16 CEST.

Flavor	Version	T_install	T_check	T_total	Status
r-devel-linux-x86_64-debian-clang	0.6	18.64	380.34	398.98	OK
r-devel-linux-x86_64-debian-gcc	0.6	15.33	254.86	270.19	OK
r-devel-linux-x86_64-fedora-clang	0.6			485.21	OK
r-devel-linux-x86_64-fedora-gcc	0.6			497.55	OK
r-devel-windows-x86_64	0.6	16.00	234.00	250.00	OK
r-patched-linux-x86_64	0.5	15.76	254.15	269.91	ERROR
r-release-linux-x86_64	0.5	18.72	260.14	278.86	ERROR
r-release-macos-arm64	0.6			82.00	OK
r-release-macos-x86_64	0.6			141.00	OK
r-release-windows-x86_64	0.6	16.00	231.00	247.00	OK
r-oldrel-macos-arm64	0.6			107.00	OK
r-oldrel-macos-x86_64	0.5			142.00	OK
r-oldrel-windows-x86_64	0.6	22.00	233.00	255.00	OK

Check Details

Version: 0.5
Check: Rd cross-references
Result: WARN
    Missing link or links in documentation object 'CoupledHeatedmcmcabn.Rd':
     ‘[abn:build_score_cache]{buildScoreCache}’
     ‘[abn:search_heuristic]{searchHeuristic}’

    Missing link or links in documentation object 'abnCache_asia.Rd':
     ‘[abn:build_score_cache]{buildScoreCache}’

    Missing link or links in documentation object 'mcmc.Rd':
     ‘[abn:build_score_cache]{buildScoreCache}’
     ‘[abn:search_heuristic]{searchHeuristic}’

    Missing link or links in documentation object 'mcmc_asia.Rd':
     ‘[abn:build_score_cache]{buildScoreCache}’

    See section 'Cross-references' in the 'Writing R Extensions' manual.
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.5
Check: tests
Result: ERROR
     Running ‘testthat.R’ [107s/119s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > if (require("testthat", character.only = TRUE)) {
     + test_check("mcmcabn")
     + }
     Loading required package: testthat
     Loading required package: mcmcabn
     Step1. completed max alpha_i(S) for all i and S
     Total sets g(S) to be evaluated over: 256
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 4 ]

     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error ('test.R:36:3'): mc3 ──────────────────────────────────────────────────
     Error in `simulateAbn(data.dists = dist, n.chains = 1, n.adapt = 1000,
     n.thin = 1, n.iter = 1000, data.param = 0.4 * data.param,
     simulate = TRUE, seed = 132, verbose = FALSE)`: unused arguments (data.dists = dist, data.param = 0.4 * data.param, simulate = TRUE)
     ── Error ('test.R:120:3'): REV ─────────────────────────────────────────────────
     Error in `simulateAbn(data.dists = dist, n.chains = 1, n.adapt = 1000,
     n.thin = 1, n.iter = 1000, data.param = 0.4 * data.param,
     simulate = TRUE, seed = 132)`: unused arguments (data.dists = dist, data.param = 0.4 * data.param, simulate = TRUE)
     ── Error ('test.R:199:3'): MBR ─────────────────────────────────────────────────
     Error in `simulateAbn(data.dists = dist, n.chains = 1, n.adapt = 1000,
     n.thin = 1, n.iter = 1000, data.param = 0.4 * data.param,
     simulate = TRUE, seed = 132)`: unused arguments (data.dists = dist, data.param = 0.4 * data.param, simulate = TRUE)
     ── Error ('test.R:243:3'): mcmcabn ─────────────────────────────────────────────
     Error in `simulateAbn(data.dists = dist, n.chains = 1, n.adapt = 20, n.thin = 1,
     n.iter = 100, data.param = data.param.0, simulate = TRUE,
     seed = 132)`: unused arguments (data.dists = dist, data.param = data.param.0, simulate = TRUE)
     ── Error ('test.R:528:1'): mcmcabnHeated ───────────────────────────────────────
     Error in `fitAbn(object = dag, data.df = asia, data.dists = dist.asia)`: `data.df` and `object` provided but can only accept one of them.
     Backtrace:
     ▆
     1. ├─testthat::expect_equal(...) at test.R:528:0
     2. │ └─testthat::quasi_label(enquo(expected), expected.label, arg = "expected")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. └─abn::fitAbn(object = dag, data.df = asia, data.dists = dist.asia)

     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 4 ]
     Error: Test failures
     Execution halted
Flavor: r-patched-linux-x86_64

Version: 0.5
Check: re-building of vignette outputs
Result: ERROR
    Error(s) in re-building vignettes:
     ...
    --- re-building ‘mcmcabn.Rmd’ using rmarkdown

    Quitting from lines 143-149 [unnamed-chunk-7] (mcmcabn.Rmd)
    Error: processing vignette 'mcmcabn.Rmd' failed with diagnostics:
    `data.df` and `object` provided but can only accept one of them.
    --- failed re-building ‘mcmcabn.Rmd’

    SUMMARY: processing the following file failed:
     ‘mcmcabn.Rmd’

    Error: Vignette re-building failed.
    Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64

Version: 0.5
Check: tests
Result: ERROR
     Running ‘testthat.R’ [110s/128s]
    Running the tests in ‘tests/testthat.R’ failed.
    Complete output:
     > if (require("testthat", character.only = TRUE)) {
     + test_check("mcmcabn")
     + }
     Loading required package: testthat
     Loading required package: mcmcabn
     Step1. completed max alpha_i(S) for all i and S
     Total sets g(S) to be evaluated over: 256
     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 4 ]

     ══ Failed tests ════════════════════════════════════════════════════════════════
     ── Error ('test.R:36:3'): mc3 ──────────────────────────────────────────────────
     Error in `simulateAbn(data.dists = dist, n.chains = 1, n.adapt = 1000,
     n.thin = 1, n.iter = 1000, data.param = 0.4 * data.param,
     simulate = TRUE, seed = 132, verbose = FALSE)`: unused arguments (data.dists = dist, data.param = 0.4 * data.param, simulate = TRUE)
     ── Error ('test.R:120:3'): REV ─────────────────────────────────────────────────
     Error in `simulateAbn(data.dists = dist, n.chains = 1, n.adapt = 1000,
     n.thin = 1, n.iter = 1000, data.param = 0.4 * data.param,
     simulate = TRUE, seed = 132)`: unused arguments (data.dists = dist, data.param = 0.4 * data.param, simulate = TRUE)
     ── Error ('test.R:199:3'): MBR ─────────────────────────────────────────────────
     Error in `simulateAbn(data.dists = dist, n.chains = 1, n.adapt = 1000,
     n.thin = 1, n.iter = 1000, data.param = 0.4 * data.param,
     simulate = TRUE, seed = 132)`: unused arguments (data.dists = dist, data.param = 0.4 * data.param, simulate = TRUE)
     ── Error ('test.R:243:3'): mcmcabn ─────────────────────────────────────────────
     Error in `simulateAbn(data.dists = dist, n.chains = 1, n.adapt = 20, n.thin = 1,
     n.iter = 100, data.param = data.param.0, simulate = TRUE,
     seed = 132)`: unused arguments (data.dists = dist, data.param = data.param.0, simulate = TRUE)
     ── Error ('test.R:528:1'): mcmcabnHeated ───────────────────────────────────────
     Error in `fitAbn(object = dag, data.df = asia, data.dists = dist.asia)`: `data.df` and `object` provided but can only accept one of them.
     Backtrace:
     ▆
     1. ├─testthat::expect_equal(...) at test.R:528:0
     2. │ └─testthat::quasi_label(enquo(expected), expected.label, arg = "expected")
     3. │ └─rlang::eval_bare(expr, quo_get_env(quo))
     4. └─abn::fitAbn(object = dag, data.df = asia, data.dists = dist.asia)

     [ FAIL 5 | WARN 0 | SKIP 0 | PASS 4 ]
     Error: Test failures
     Execution halted
Flavor: r-release-linux-x86_64