HiCfeat: Multiple Logistic Regression for 3D Chromatin Domain Border Analysis

We propose a multiple logistic regression model to assess the influences of genomic features such as DNA-binding proteins and functional elements on topological domain borders.

Version: 1.4
Depends: R (≥ 3.2.0), GenomicRanges, Matrix, glmnet, rtracklayer
Imports: IRanges, GenomeInfoDb, methods
Published: 2018-12-04
Author: Raphael Mourad
Maintainer: Raphael Mourad <raphael.mourad at ibcg.biotoul.fr>
License: GPL-2
NeedsCompilation: no
CRAN checks: HiCfeat results


Reference manual: HiCfeat.pdf


Package source: HiCfeat_1.4.tar.gz
Windows binaries: r-devel: HiCfeat_1.4.zip, r-release: HiCfeat_1.4.zip, r-oldrel: HiCfeat_1.4.zip
macOS binaries: r-release (arm64): HiCfeat_1.4.tgz, r-oldrel (arm64): HiCfeat_1.4.tgz, r-release (x86_64): HiCfeat_1.4.tgz, r-oldrel (x86_64): HiCfeat_1.4.tgz
Old sources: HiCfeat archive


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